Selected Publications:


Before arrival at ASU



2010

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Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, Liu T, Yip KY, Robilotto R, Rechtsteiner A, Ikegami K, Alves P, Chateigner A, Perry M, Morris M, Auerbach RK, Feng X, Leng J, Vielle A, Niu W, Rhrissorrakrai K, Agarwal A, Alexander RP, Barber G, Brdlik CM, Brennan J, Brouillet JJ, Carr A, Cheung MS, Clawson H, Contrino S, Dannenberg LO, Dernburg AF, Desai A, Dick L, Dosé AC, Du J, Egelhofer T, Ercan S, Euskirchen G, Ewing B, Feingold EA, Gassmann R, Good PJ, Green P, Gullier F, Gutwein M, Guyer MS, Habegger L, Han T, Henikoff JG, Henz SR, Hinrichs A, Holster H, Hyman T, Iniguez AL, Janette J, Jensen M, Kato M, Kent WJ, Kephart E, Khivansara V, Khurana E, Kim JK, Kolasinska-Zwierz P, Lai EC, Latorre I, Leahey A, Lewis S, Lloyd P, Lochovsky L, Lowdon RF, Lubling Y, Lyne R, MacCoss M, Mackowiak SD, Mangone M, McKay S, Mecenas D, Merrihew G, Miller DM 3rd, Muroyama A, Murray JI, Ooi SL, Pham H, Phippen T, Preston EA, Rajewsky N, Rätsch G, Rosenbaum H, Rozowsky J, Rutherford K, Ruzanov P, Sarov M, Sasidharan R, Sboner A, Scheid P, Segal E, Shin H, Shou C, Slack FJ, Slightam C, Smith R, Spencer WC, Stinson EO, Taing S, Takasaki T, Vafeados D, Voronina K, Wang G, Washington NL, Whittle CM, Wu B, Yan KK, Zeller G, Zha Z, Zhong M, Zhou X; modENCODE Consortium, Ahringer J, Strome S, Gunsalus KC, Micklem G, Liu XS, Reinke V, Kim SK, Hillier LW, Henikoff S, Piano F, Snyder M, Stein L, Lieb JD, Waterston RH.
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
Science 2010 Dec 24;330(6012):1775-87


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Mangone M, Myers MP, Herr W (2010)
Role of the HCF-1 Basic Region in Sustaining Cell Proliferation.
PLoS ONE 2010; Feb 2;5(2):e9020.


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Mangone M, Prasad Manoharan A, Thierry-Mieg D, Thierry-Mieg J, Han T, Mackowiak S, Mis E, Zegar C, Gutwein MR, Khivansara V, Attie O, Chen K, Salehi-Ashtiani K, Vidal M, Harkins T, Bouffard P, Suzuki Y, Sugano S, Kohara Y, Rajewsky N, Piano F, Gunsalus KC, Kim JK (2010)
The Landscape of C. elegans 3 'UTRs.
Science June 3, 2010 DOI: 10.1126/science.1191244.



2009

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The modENCODE CONSORTIUM.
Unlocking the secrets of the genomes.
Nature 2009; Jun 18;459 (7249):927-30.



2007

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Mangone M, Macmenamin P, Zegar C, Piano F, Gunsalus KC (2007)
UTRome.org: a platform for 3'UTR biology in C. elegans.
Nucleic Acids Res 008 Jan; 36:D57-62. Epub 2007 Nov 5.



2002

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Stein LD, Mangone M, Day A, Harris T, Arva A, Shu SQ, Lewis S and Mungall C (2002)
The Generic Genome Browser: A Building Block for a Model Organism System Database.
Genome Res Oct 2002; 12: 1599–1610 (cited 436 times)



2001

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Mangone M and Stein LD (2001) Applied Perl (Williams).
Perl and ACEDB
Chapter 13 p. 357-383 Paperback - 405 pages (May 2001) Hungry Minds, Inc; ISBN: 0764547836.

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Piano F, Schetter AJ, Mangone M, Stein LD, Kemphues KJ (2001)
RNAi analysis of genes expressed in the ovary of Caenorhabditis elegans.
Current Biology 10: 1619-1622 2001.

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Stein L, Mangone M, Schwarz E, Durbin R, Thierry-Mieg J, Spieth J, Sternberg P (2001)
WormBase: network access to the genome and biology of Caenorhabditis elegans.
Nucleic Acids Res 001 Jan 1;29(1):82-6.